PDB Entry (5tjx)

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PDB ID: 5tjx Resolution: 1.41 Å Exp. Method: X-RAY DIFFRACTION
PMID: 28197309 DOI: 10.1021/acsmedchemlett.6b00384
Protein
Protein Name: Plasma kallikrein
Protein Class: HYDROLASE
Uniprot ID/ACC: P03952 (KLKB1_HUMAN) Organism: Homo sapiens
Gene Symbol: KLKB1 Gene ID: 3818
Pocket Descriptors
Volume: 1022.91 Depth: 28.7917
Hydrophobicity: 0.661871 Drug Score: 0.584546
Pocket Similarity: Calculate
Ligand
Ligand Name:   (8E)-3-amino-1-methyl-15-[(1H-pyrazol-1-yl)methyl]-7,10,11,12,24,25-hexahydro-6H,18H,23H-19,22-(metheno)pyrido[4,3-j][1,9,13,17,18]benzodioxatriazacyclohenicosin-23-one
HET ID:   GBT PubChem:   134131589
DrugBank:   - ChEMBL:   CHEMBL3884851
Canonical SMILES:   Nc1cc2OCC/C=C/CCCOc3c(Cn4cc(C(=O)NCc2c(n1)C)cn4)ccc(c3)Cn1cccn1
Standard InChI:   InChI=1S/C29H33N7O3/c1-21-25-17-31-29(37)24-16-33-36(20-24)19-23-9-8-22(18-35-11-7-10-32-35)14-26(23)38-12-5-3-2-4-6-13-39-27(25)15-28(30)34-21/h2,4,7-11,14-16,20H,3,5-6,12-13,17-19H2,1H3,(H2,30,34)(H,31,37)/b4-2+
Molecular Formula:   C29H33N7O3 Mol. Weight:   527.61743 Heavy Atoms:   39
Charge:   0 Is Chiral:   False logP:   4.7995
HBD:   2 HBA:   10 TPSA:   122.11
#Bonds:   43 #Rotatable Bonds:   2 Shape Complexity:   0.31034482
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
BindingDB IC50 : 2 nM/4.8nM