PDB Entry (6nft) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6nft | Resolution: 1.65 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
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Protein Name: Ubiquitin carboxyl-terminal hydrolase 5 | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P45974 (UBP5_HUMAN) | Organism: Homo sapiens |
Gene Symbol: USP5 | Gene ID: 8078 |
Pocket Descriptors | |
Volume: 357.12 | Depth: 18.9737 |
Hydrophobicity: 0.7 | Drug Score: 0.177962 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (4-oxoquinazolin-3(4H)-yl)acetic acid | ||
HET ID: KKG | PubChem: 729359 | |
DrugBank: - | ChEMBL: CHEMBL1471153 | |
Canonical SMILES: OC(=O)Cn1cnc2c(c1=O)cccc2 | ||
Standard InChI: InChI=1S/C10H8N2O3/c13-9(14)5-12-6-11-8-4-2-1-3-7(8)10(12)15/h1-4,6H,5H2,(H,13,14) | ||
Molecular Formula: C10H8N2O3 | Mol. Weight: 204.18211 | Heavy Atoms: 15 |
Charge: 0 | Is Chiral: False | logP: 0.4811 |
HBD: 1 | HBA: 5 | TPSA: 72.19 |
#Bonds: 16 | #Rotatable Bonds: 2 | Shape Complexity: 0.1 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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