PDB Entry (5cpr)

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Visualizer: MichelaNGLo

PDB ID: 5cpr Resolution: 2.22 Å Exp. Method: X-RAY DIFFRACTION
PMID: 28114273 DOI: 10.1038/nchembio.2282
Protein
Protein Name: Histone-lysine N-methyltransferase KMT5B
Protein Class: TRANSFERASE
Uniprot ID/ACC: Q4FZB7 (KMT5B_HUMAN) Organism: Homo sapiens
Gene Symbol: KMT5B Gene ID: 51111
Pocket Descriptors
Volume: 1417.09 Depth: 29.2793
Hydrophobicity: 0.659649 Drug Score: 0.802015
Pocket Similarity: Calculate
Ligand
Ligand Name:   6,7-dichloro-N-cyclopentyl-4-(pyridin-4-yl)phthalazin-1-amine
HET ID:   539 PubChem:   117072548
DrugBank:   - ChEMBL:   -
Canonical SMILES:   Clc1cc2c(nnc(c2cc1Cl)NC1CCCC1)c1ccncc1
Standard InChI:   InChI=1S/C18H16Cl2N4/c19-15-9-13-14(10-16(15)20)18(22-12-3-1-2-4-12)24-23-17(13)11-5-7-21-8-6-11/h5-10,12H,1-4H2,(H,22,24)
Molecular Formula:   C18H16Cl2N4 Mol. Weight:   359.25244 Heavy Atoms:   24
Charge:   0 Is Chiral:   False logP:   5.4261
HBD:   1 HBA:   4 TPSA:   50.7
#Bonds:   27 #Rotatable Bonds:   3 Shape Complexity:   0.2777778
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-