PDB Entry (5cpr) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5cpr | Resolution: 2.22 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 28114273 | DOI: 10.1038/nchembio.2282 | |
Protein |
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Protein Name: Histone-lysine N-methyltransferase KMT5B | |
Protein Class: TRANSFERASE | |
Uniprot ID/ACC: Q4FZB7 (KMT5B_HUMAN) | Organism: Homo sapiens |
Gene Symbol: KMT5B | Gene ID: 51111 |
Pocket Descriptors | |
Volume: 1417.09 | Depth: 29.2793 |
Hydrophobicity: 0.659649 | Drug Score: 0.802015 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 6,7-dichloro-N-cyclopentyl-4-(pyridin-4-yl)phthalazin-1-amine | ||
HET ID: 539 | PubChem: 117072548 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: Clc1cc2c(nnc(c2cc1Cl)NC1CCCC1)c1ccncc1 | ||
Standard InChI: InChI=1S/C18H16Cl2N4/c19-15-9-13-14(10-16(15)20)18(22-12-3-1-2-4-12)24-23-17(13)11-5-7-21-8-6-11/h5-10,12H,1-4H2,(H,22,24) | ||
Molecular Formula: C18H16Cl2N4 | Mol. Weight: 359.25244 | Heavy Atoms: 24 |
Charge: 0 | Is Chiral: False | logP: 5.4261 |
HBD: 1 | HBA: 4 | TPSA: 50.7 |
#Bonds: 27 | #Rotatable Bonds: 3 | Shape Complexity: 0.2777778 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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