PDB Entry (4z5x)

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Visualizer: MichelaNGLo

PDB ID: 4z5x Resolution: 2.1 Å Exp. Method: X-RAY DIFFRACTION
PMID: 25980608 DOI: 10.1016/j.febslet.2015.05.013
Protein
Protein Name: Glycogen phosphorylase, muscle form
Protein Class: TRANSFERASE
Uniprot ID/ACC: P00489 (PYGM_RABIT) Organism: Oryctolagus cuniculus
Gene Symbol: - Gene ID: 100008972
Pocket Descriptors
Volume: 151.68 Depth: 15.1177
Hydrophobicity: 0.75 Drug Score: 0.0952617
Pocket Similarity: Calculate
Ligand
Ligand Name:   3,4,5-trihydroxybenzoic acid
HET ID:   GDE PubChem:   370
DrugBank:   - ChEMBL:   CHEMBL288114
Canonical SMILES:   OC(=O)c1cc(O)c(c(c1)O)O
Standard InChI:   InChI=1S/C7H6O5/c8-4-1-3(7(11)12)2-5(9)6(4)10/h1-2,8-10H,(H,11,12)
Molecular Formula:   C7H6O5 Mol. Weight:   170.11954 Heavy Atoms:   12
Charge:   0 Is Chiral:   False logP:   0.5016
HBD:   4 HBA:   5 TPSA:   97.99
#Bonds:   12 #Rotatable Bonds:   1 Shape Complexity:   0.0
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
Binding MOAD Ki : 1730000 nM