PDB Entry (2p2v) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 2p2v | Resolution: 1.85 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 17518445 | DOI: 10.1021/bi602543d | |
Protein |
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Protein Name: Alpha-2,3-sialyltransferase | |
Protein Class: TRANSFERASE | |
Uniprot ID/ACC: Q9RGF1 (Q9RGF1_CAMJU) | Organism: Campylobacter jejuni |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 1112.64 | Depth: 28.5489 |
Hydrophobicity: 0.730769 | Drug Score: 0.783003 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID | ||
HET ID: CSF | PubChem: 4369303 | |
DrugBank: - | ChEMBL: CHEMBL1231948 | |
Canonical SMILES: OC[C@H]([C@H]([C@@H]1O[C@](O[P@@](=O)(OC[C@H]2O[C@H]([C@@H]([C@@H]2O)O)n2ccc(nc2=O)N)O)(C(=O)O)[C@@H]([C@@H]([C@H]1NC(=O)C)O)F)O)O | ||
Standard InChI: InChI=1S/C20H30FN4O16P/c1-6(27)23-10-13(31)16(21)20(18(33)34,40-15(10)11(29)7(28)4-26)41-42(36,37)38-5-8-12(30)14(32)17(39-8)25-3-2-9(22)24-19(25)35/h2-3,7-8,10-17,26,28-32H,4-5H2,1H3,(H,23,27)(H,33,34)(H,36,37)(H2,22,24,35)/t7-,8-,10-,11-,12-,13-,14-,15-,16-,17-,20-/m1/s1 | ||
Molecular Formula: C20H30FN4O16P | Mol. Weight: 632.4416 | Heavy Atoms: 42 |
Charge: 0 | Is Chiral: True | logP: -4.3521 |
HBD: 10 | HBA: 20 | TPSA: 332.72 |
#Bonds: 54 | #Rotatable Bonds: 12 | Shape Complexity: 0.7 |
Stereocomplexity: 0.6 | Ligand Type: Small Molecule |
Binding Affinity |
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