PDB Entry (5u7v) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5u7v | Resolution: 2.15 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 28543850 | DOI: 10.1002/pro.3199 | |
Protein |
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Protein Name: Apyrase | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: B9U139 (B9U139_TRIRP) | Organism: Trifolium repens |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 518.208 | Depth: 18.2866 |
Hydrophobicity: 0.630137 | Drug Score: 0.161992 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: ADENOSINE MONOPHOSPHATE | ||
HET ID: AMP | PubChem: 6083 | |
DrugBank: DB00131 | ChEMBL: CHEMBL752 | |
Canonical SMILES: O[C@@H]1[C@H](O)[C@H](O[C@H]1n1cnc2c1ncnc2N)COP(=O)(O)O | ||
Standard InChI: InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1 | ||
Molecular Formula: C10H14N5O7P | Mol. Weight: 347.22122 | Heavy Atoms: 23 |
Charge: 0 | Is Chiral: True | logP: -1.2818 |
HBD: 5 | HBA: 12 | TPSA: 195.88 |
#Bonds: 29 | #Rotatable Bonds: 4 | Shape Complexity: 0.5 |
Stereocomplexity: 0.4 | Ligand Type: Small Molecule |
Binding Affinity |
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