PDB Entry (5t4k)

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Visualizer: MichelaNGLo

PDB ID: 5t4k Resolution: 2.24 Å Exp. Method: X-RAY DIFFRACTION
PMID: 28348215 DOI: 10.1073/pnas.1703019114
Protein
Protein Name: HTH-type transcriptional regulatory protein GabR
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: P94426 (GABR_BACSU) Organism: Bacillus subtilis
Gene Symbol: - Gene ID: 938271
Pocket Descriptors
Volume: 1133.44 Depth: 26.135
Hydrophobicity: 0.639073 Drug Score: 0.222308
Pocket Similarity: Calculate
Ligand
Ligand Name:   (4S)-5-fluoro-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]pentanoic acid
HET ID:   76U PubChem:   124222740
DrugBank:   - ChEMBL:   -
Canonical SMILES:   FC[C@@H](NCc1c(cnc(c1O)C)COP(=O)(O)O)CCC(=O)O
Standard InChI:   InChI=1S/C13H20FN2O7P/c1-8-13(19)11(6-16-10(4-14)2-3-12(17)18)9(5-15-8)7-23-24(20,21)22/h5,10,16,19H,2-4,6-7H2,1H3,(H,17,18)(H2,20,21,22)/t10-/m0/s1
Molecular Formula:   C13H20FN2O7P Mol. Weight:   366.27927 Heavy Atoms:   24
Charge:   0 Is Chiral:   True logP:   1.3883
HBD:   5 HBA:   9 TPSA:   159.02
#Bonds:   25 #Rotatable Bonds:   10 Shape Complexity:   0.53846157
Stereocomplexity:   0.07692308 Ligand Type:   Small Molecule
Binding Affinity
-