PDB Entry (6x4c)

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Visualizer: MichelaNGLo

PDB ID: 6x4c Resolution: 2.86 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32643196 DOI: 10.1002/pro.3910
Protein
Protein Name: Gag-Pol polyprotein
Protein Class: VIRAL PROTEIN
Uniprot ID/ACC: P03366 (POL_HV1B1) Organism: Human immunodeficiency virus type 1 group M subtype B
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 782.592 Depth: 39.1582
Hydrophobicity: 0.742747 Drug Score: 0.706783
Pocket Similarity: Calculate
Ligand
Ligand Name:   7-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-5,8-dimethylnaphthalene-2-carbonitrile
HET ID:   UNS PubChem:   129908019
DrugBank:   - ChEMBL:   CHEMBL3955409
Canonical SMILES:   N#Cc1ccc2c(c1)c(C)c(cc2C)Oc1ccc(cc1OCCn1ccc(=O)[nH]c1=O)F
Standard InChI:   InChI=1S/C25H20FN3O4/c1-15-11-22(16(2)20-12-17(14-27)3-5-19(15)20)33-21-6-4-18(26)13-23(21)32-10-9-29-8-7-24(30)28-25(29)31/h3-8,11-13H,9-10H2,1-2H3,(H,28,30,31)
Molecular Formula:   C25H20FN3O4 Mol. Weight:   445.4424 Heavy Atoms:   33
Charge:   0 Is Chiral:   False logP:   4.18868
HBD:   1 HBA:   6 TPSA:   97.11
#Bonds:   37 #Rotatable Bonds:   6 Shape Complexity:   0.16666667
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-