PDB Entry (6osp) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6osp | Resolution: 2.21 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32130941 | DOI: 10.1016/j.chembiol.2020.02.003 | |
Protein |
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Protein Name: Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha | |
Protein Class: TRANSFERASE | |
Uniprot ID/ACC: P48426 (PI42A_HUMAN) | Organism: Homo sapiens |
Gene Symbol: PIP4K2A | Gene ID: 5305 |
Pocket Descriptors | |
Volume: 385.728 | Depth: 18.1349 |
Hydrophobicity: 0.769912 | Drug Score: 0.463658 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 4-{[(2E)-4-(dimethylamino)but-2-enoyl]amino}-N-(3-{[6-(1H-indol-3-yl)pyrimidin-4-yl]amino}phenyl)benzamide | ||
HET ID: N51 | PubChem: 134451950 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CN(C/C=C/C(=O)Nc1ccc(cc1)C(=O)Nc1cccc(c1)Nc1ncnc(c1)c1c[nH]c2c1cccc2)C | ||
Standard InChI: InChI=1S/C31H29N7O2/c1-38(2)16-6-11-30(39)36-22-14-12-21(13-15-22)31(40)37-24-8-5-7-23(17-24)35-29-18-28(33-20-34-29)26-19-32-27-10-4-3-9-25(26)27/h3-15,17-20,32H,16H2,1-2H3,(H,36,39)(H,37,40)(H,33,34,35)/b11-6+ | ||
Molecular Formula: C31H29N7O2 | Mol. Weight: 531.60767 | Heavy Atoms: 40 |
Charge: 0 | Is Chiral: False | logP: 5.8961 |
HBD: 4 | HBA: 7 | TPSA: 115.04 |
#Bonds: 45 | #Rotatable Bonds: 11 | Shape Complexity: 0.09677419 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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