PDB Entry (6osp)

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Visualizer: MichelaNGLo

PDB ID: 6osp Resolution: 2.21 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32130941 DOI: 10.1016/j.chembiol.2020.02.003
Protein
Protein Name: Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
Protein Class: TRANSFERASE
Uniprot ID/ACC: P48426 (PI42A_HUMAN) Organism: Homo sapiens
Gene Symbol: PIP4K2A Gene ID: 5305
Pocket Descriptors
Volume: 385.728 Depth: 18.1349
Hydrophobicity: 0.769912 Drug Score: 0.463658
Pocket Similarity: Calculate
Ligand
Ligand Name:   4-{[(2E)-4-(dimethylamino)but-2-enoyl]amino}-N-(3-{[6-(1H-indol-3-yl)pyrimidin-4-yl]amino}phenyl)benzamide
HET ID:   N51 PubChem:   134451950
DrugBank:   - ChEMBL:   -
Canonical SMILES:   CN(C/C=C/C(=O)Nc1ccc(cc1)C(=O)Nc1cccc(c1)Nc1ncnc(c1)c1c[nH]c2c1cccc2)C
Standard InChI:   InChI=1S/C31H29N7O2/c1-38(2)16-6-11-30(39)36-22-14-12-21(13-15-22)31(40)37-24-8-5-7-23(17-24)35-29-18-28(33-20-34-29)26-19-32-27-10-4-3-9-25(26)27/h3-15,17-20,32H,16H2,1-2H3,(H,36,39)(H,37,40)(H,33,34,35)/b11-6+
Molecular Formula:   C31H29N7O2 Mol. Weight:   531.60767 Heavy Atoms:   40
Charge:   0 Is Chiral:   False logP:   5.8961
HBD:   4 HBA:   7 TPSA:   115.04
#Bonds:   45 #Rotatable Bonds:   11 Shape Complexity:   0.09677419
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
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