PDB Entry (6kya)

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Visualizer: MichelaNGLo

PDB ID: 6kya Resolution: 2.89 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32233366 DOI: 10.1021/acs.jmedchem.9b02128
Protein
Protein Name: Toll-like receptor 8
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: Q9NR97 (TLR8_HUMAN) Organism: Homo sapiens
Gene Symbol: TLR8 Gene ID: 51311
Pocket Descriptors
Volume: 780.224 Depth: 47.3223
Hydrophobicity: 0.709024 Drug Score: 0.821554
Pocket Similarity: Calculate
Ligand
Ligand Name:   3-[5-methylsulfanyl-4-(3,4,5-trimethylphenyl)-1,2,4-triazol-3-yl]propan-1-ol
HET ID:   DY3 PubChem:   146037590
DrugBank:   - ChEMBL:   -
Canonical SMILES:   OCCCc1nnc(n1c1cc(C)c(c(c1)C)C)SC
Standard InChI:   InChI=1S/C15H21N3OS/c1-10-8-13(9-11(2)12(10)3)18-14(6-5-7-19)16-17-15(18)20-4/h8-9,19H,5-7H2,1-4H3
Molecular Formula:   C15H21N3OS Mol. Weight:   291.41174 Heavy Atoms:   20
Charge:   0 Is Chiral:   False logP:   2.8393
HBD:   1 HBA:   5 TPSA:   76.24
#Bonds:   21 #Rotatable Bonds:   5 Shape Complexity:   0.46666667
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-