PDB Entry (6kl6)

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Visualizer: MichelaNGLo

PDB ID: 6kl6 Resolution: 2.77 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32105468 DOI: 10.1021/acs.jmedchem.9b01913
Protein
Protein Name: Nucleoprotein
Protein Class: VIRAL PROTEIN
Uniprot ID/ACC: K9N4V7 (NCAP_MERS1) Organism: Middle East respiratory syndrome-related coronavirus
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 709.76 Depth: 23.815
Hydrophobicity: 0.65812 Drug Score: 0.316934
Pocket Similarity: Calculate
Ligand
Ligand Name:   N,N-dimethyl-1-(5-phenylmethoxy-1H-indol-3-yl)methanamine
HET ID:   DJU PubChem:   73814
DrugBank:   - ChEMBL:   -
Canonical SMILES:   CN(Cc1c[nH]c2c1cc(OCc1ccccc1)cc2)C
Standard InChI:   InChI=1S/C18H20N2O/c1-20(2)12-15-11-19-18-9-8-16(10-17(15)18)21-13-14-6-4-3-5-7-14/h3-11,19H,12-13H2,1-2H3
Molecular Formula:   C18H20N2O Mol. Weight:   280.3642 Heavy Atoms:   21
Charge:   0 Is Chiral:   False logP:   3.8085
HBD:   1 HBA:   2 TPSA:   28.26
#Bonds:   24 #Rotatable Bonds:   5 Shape Complexity:   0.22222222
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-