PDB Entry (6kx5)

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Visualizer: MichelaNGLo

PDB ID: 6kx5 Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32231341 DOI: 10.1038/s41589-020-0505-1
Protein
Protein Name: Cryptochrome-1
Protein Class: CELL CYCLE
Uniprot ID/ACC: P97784 (CRY1_MOUSE) Organism: Mus musculus
Gene Symbol: Cry1 Gene ID: 12952
Pocket Descriptors
Volume: 672.448 Depth: 16.4468
Hydrophobicity: 0.741259 Drug Score: 0.845452
Pocket Similarity: Calculate
Ligand
Ligand Name:   2-carbazol-9-yl-N-(2-chloranyl-6-cyano-phenyl)ethanamide
HET ID:   DYR PubChem:   91827381
DrugBank:   - ChEMBL:   -
Canonical SMILES:   N#Cc1cccc(c1NC(=O)Cn1c2ccccc2c2c1cccc2)Cl
Standard InChI:   InChI=1S/C21H14ClN3O/c22-17-9-5-6-14(12-23)21(17)24-20(26)13-25-18-10-3-1-7-15(18)16-8-2-4-11-19(16)25/h1-11H,13H2,(H,24,26)
Molecular Formula:   C21H14ClN3O Mol. Weight:   359.80835 Heavy Atoms:   26
Charge:   0 Is Chiral:   False logP:   5.03128
HBD:   1 HBA:   4 TPSA:   57.82
#Bonds:   29 #Rotatable Bonds:   4 Shape Complexity:   0.05
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-