PDB Entry (6w2y)

Download

Visualizer: MichelaNGLo

PDB ID: 6w2y Resolution: 3.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32580208 DOI: 10.1038/s41586-020-2469-4
Protein
Protein Name: Gamma-aminobutyric acid type B receptor subunit 1
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: Q9UBS5 (GABR1_HUMAN) Organism: Homo sapiens
Gene Symbol: GABBR1 Gene ID: 2550
Pocket Descriptors
Volume: 125.632 Depth: 14.4635
Hydrophobicity: 0.744186 Drug Score: 0.113392
Pocket Similarity: Calculate
Ligand
Ligand Name:   [(2~{S})-3-[[(1~{S})-1-(3,4-dichlorophenyl)ethyl]amino]-2-oxidanyl-propyl]-(phenylmethyl)phosphinic acid
HET ID:   SGG PubChem:   5311042
DrugBank:   - ChEMBL:   CHEMBL455185
Canonical SMILES:   O[C@H](C[P@](=O)(Cc1ccccc1)O)CN[C@H](c1ccc(c(c1)Cl)Cl)C
Standard InChI:   InChI=1S/C18H22Cl2NO3P/c1-13(15-7-8-17(19)18(20)9-15)21-10-16(22)12-25(23,24)11-14-5-3-2-4-6-14/h2-9,13,16,21-22H,10-12H2,1H3,(H,23,24)/t13-,16-/m0/s1
Molecular Formula:   C18H22Cl2NO3P Mol. Weight:   402.25195 Heavy Atoms:   25
Charge:   0 Is Chiral:   True logP:   4.8664
HBD:   3 HBA:   4 TPSA:   79.37
#Bonds:   28 #Rotatable Bonds:   8 Shape Complexity:   0.33333334
Stereocomplexity:   0.16666667 Ligand Type:   Small Molecule
Binding Affinity
-