PDB Entry (6w2x)

Download

Visualizer: MichelaNGLo

PDB ID: 6w2x Resolution: 3.6 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32580208 DOI: 10.1038/s41586-020-2469-4
Protein
Protein Name: Gamma-aminobutyric acid type B receptor subunit 1
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: Q9UBS5 (GABR1_HUMAN) Organism: Homo sapiens
Gene Symbol: GABBR1 Gene ID: 2550
Pocket Descriptors
Volume: 298.944 Depth: 45.8625
Hydrophobicity: 0.710106 Drug Score: 0.0118403
Pocket Similarity: Calculate
Ligand
Ligand Name:   (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate
HET ID:   L9Q PubChem:   23727970
DrugBank:   - ChEMBL:   CHEMBL1233945
Canonical SMILES:   CCCCCCCCCCCCCCCCCC(=O)OC[C@H](OC(=O)CCCCCCC/C=CCCCCCCCC)CO[P@](=O)(OCCN)O
Standard InChI:   InChI=1S/C41H80NO8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-40(43)47-37-39(38-49-51(45,46)48-36-35-42)50-41(44)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h18,20,39H,3-17,19,21-38,42H2,1-2H3,(H,45,46)/b20-18-/t39-/m0/s1
Molecular Formula:   C41H80NO8P Mol. Weight:   746.04956 Heavy Atoms:   51
Charge:   0 Is Chiral:   True logP:   12.533
HBD:   2 HBA:   9 TPSA:   144.19
#Bonds:   51 #Rotatable Bonds:   42 Shape Complexity:   0.902439
Stereocomplexity:   0.048780486 Ligand Type:   Small Molecule
Binding Affinity
-