PDB Entry (6vje)

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Visualizer: MichelaNGLo

PDB ID: 6vje Resolution: 1.76 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32152075 DOI: 10.1128/AAC.00106-20
Protein
Protein Name: Peptidoglycan D,D-transpeptidase FtsI
Protein Class: HYDROLASE
Uniprot ID/ACC: G3XD46 (FTSI_PSEAE) Organism: Pseudomonas aeruginosa
Gene Symbol: - Gene ID: 45712389
Pocket Descriptors
Volume: 847.552 Depth: 26.1222
Hydrophobicity: 0.665272 Drug Score: 0.25598
Pocket Similarity: Calculate
Ligand
Ligand Name:   (2R)-2-[(1R)-1-{[(2Z)-2-(5-amino-1,2,4-thiadiazol-3-yl)-2-(hydroxyimino)acetyl]amino}-2-oxoethyl]-5-({2-oxo-1-[(3R)-pyrrolidin-3-yl]-2,5-dihydro-1H-pyrrol-3-yl}methyl)-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid
HET ID:   RB6 PubChem:   137349935
DrugBank:   - ChEMBL:   -
Canonical SMILES:   C1CNCC1N2CC=C(C2=O)CC3=C(NC(SC3)C(C=O)NC(=O)C(=NO)C4=NSC(=N4)N)C(=O)O
Standard InChI:   InChI=1S/C20H24N8O6S2/c21-20-25-15(27-36-20)14(26-34)16(30)23-12(7-29)17-24-13(19(32)33)10(8-35-17)5-9-2-4-28(18(9)31)11-1-3-22-6-11/h2,7,11-12,17,22,24,34H,1,3-6,8H2,(H,23,30)(H,32,33)(H2,21,25,27)
Molecular Formula:   C20H24N8O6S2 Mol. Weight:   536.58453 Heavy Atoms:   36
Charge:   0 Is Chiral:   True logP:   0.0717
HBD:   6 HBA:   16 TPSA:   265.77
#Bonds:   39 #Rotatable Bonds:   10 Shape Complexity:   0.45
Stereocomplexity:   0.15 Ligand Type:   Small Molecule
Binding Affinity
-