PDB Entry (6vn6)

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Visualizer: MichelaNGLo

PDB ID: 6vn6 Resolution: 2.99 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32302140 DOI: 10.1021/acs.jmedchem.0c00245
Protein
Protein Name: Ubiquitin carboxyl-terminal hydrolase 7
Protein Class: HYDROLASE
Uniprot ID/ACC: Q93009 (UBP7_HUMAN) Organism: Homo sapiens
Gene Symbol: USP7 Gene ID: 7874
Pocket Descriptors
Volume: 317.504 Depth: 20.5343
Hydrophobicity: 0.679104 Drug Score: 0.0219658
Pocket Similarity: Calculate
Ligand
Ligand Name:   [(2R)-5-chloro-7-{2-[(2S)-1-chloro-2,3-dihydroxypropan-2-yl]thieno[3,2-b]pyridin-7-yl}-2,3-dihydro-1-benzofuran-2-yl](piperazin-1-yl)methanone
HET ID:   R4J PubChem:   146026047
DrugBank:   - ChEMBL:   -
Canonical SMILES:   OC[C@](c1cc2c(s1)c(ccn2)c1cc(Cl)cc2c1O[C@H](C2)C(=O)N1CCNCC1)(CCl)O
Standard InChI:   InChI=1S/C23H23Cl2N3O4S/c24-11-23(31,12-29)19-10-17-21(33-19)15(1-2-27-17)16-9-14(25)7-13-8-18(32-20(13)16)22(30)28-5-3-26-4-6-28/h1-2,7,9-10,18,26,29,31H,3-6,8,11-12H2/t18-,23+/m1/s1
Molecular Formula:   C23H23Cl2N3O4S Mol. Weight:   508.41742 Heavy Atoms:   33
Charge:   0 Is Chiral:   True logP:   3.0374
HBD:   3 HBA:   8 TPSA:   123.16
#Bonds:   38 #Rotatable Bonds:   6 Shape Complexity:   0.39130434
Stereocomplexity:   0.08695652 Ligand Type:   Small Molecule
Binding Affinity
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