PDB Entry (6sz3) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6sz3 | Resolution: 1.28 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32101404 | DOI: 10.1021/acschembio.9b00894 | |
Protein |
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Protein Name: YTH domain-containing protein 1 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q96MU7 (YTDC1_HUMAN) | Organism: Homo sapiens |
Gene Symbol: YTHDC1 | Gene ID: 91746 |
Pocket Descriptors | |
Volume: None | Depth: None |
Hydrophobicity: None | Drug Score: None |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: ~{N}-methyl-5,6,7,8-tetrahydroquinolin-4-amine | ||
HET ID: M1H | PubChem: 89053215 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CNc1ccnc2c1CCCC2 | ||
Standard InChI: InChI=1S/C10H14N2/c1-11-9-6-7-12-10-5-3-2-4-8(9)10/h6-7H,2-5H2,1H3,(H,11,12) | ||
Molecular Formula: C10H14N2 | Mol. Weight: 162.23157 | Heavy Atoms: 12 |
Charge: 0 | Is Chiral: False | logP: 2.0751 |
HBD: 1 | HBA: 2 | TPSA: 24.92 |
#Bonds: 13 | #Rotatable Bonds: 1 | Shape Complexity: 0.5 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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