PDB Entry (5r0e) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5r0e | Resolution: 1.59 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32413289 | DOI: 10.1016/j.str.2020.04.019 | |
Protein |
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Protein Name: Pre-mRNA-splicing factor 8 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: P33334 (PRP8_YEAST) | Organism: Saccharomyces cerevisia |
Gene Symbol: - | Gene ID: 856570 |
Pocket Descriptors | |
Volume: 386.24 | Depth: 27.7922 |
Hydrophobicity: 0.725275 | Drug Score: 0.00798731 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: ~{N}-[5-azanyl-2,4-bis(fluoranyl)phenyl]propane-1-sulfonamide | ||
HET ID: SY4 | PubChem: 43550982 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CCCS(=O)(=O)Nc1cc(N)c(cc1F)F | ||
Standard InChI: InChI=1S/C9H12F2N2O2S/c1-2-3-16(14,15)13-9-5-8(12)6(10)4-7(9)11/h4-5,13H,2-3,12H2,1H3 | ||
Molecular Formula: C9H12F2N2O2S | Mol. Weight: 250.26558 | Heavy Atoms: 16 |
Charge: 0 | Is Chiral: False | logP: 3.4337 |
HBD: 2 | HBA: 4 | TPSA: 80.57 |
#Bonds: 16 | #Rotatable Bonds: 4 | Shape Complexity: 0.33333334 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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