PDB Entry (5r5b) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5r5b | Resolution: 1.53 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
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Protein Name: Uridine diphosphate glucose pyrophosphatase NUDT22 | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: Q9BRQ3 (NUD22_HUMAN) | Organism: Homo sapiens |
Gene Symbol: NUDT22 | Gene ID: 84304 |
Pocket Descriptors | |
Volume: 1302.27 | Depth: 18.7446 |
Hydrophobicity: 0.670412 | Drug Score: 0.801118 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: STIGMATELLIN | ||
HET ID: SIG | PubChem: 5289372 | |
DrugBank: - | ChEMBL: CHEMBL1235945 | |
Canonical SMILES: C/C=C(/C=C/C=C/[C@@H]([C@@H]([C@@H]([C@@H](CCc1oc2c(O)c(OC)cc(c2c(=O)c1C)OC)C)C)C)C)C | ||
Standard InChI: InChI=1S/C30H42O5/c1-10-18(2)13-11-12-14-19(3)21(5)22(6)20(4)15-16-24-23(7)28(31)27-25(33-8)17-26(34-9)29(32)30(27)35-24/h10-14,17,19-22,32H,15-16H2,1-9H3/b13-11+,14-12+,18-10+/t19-,20+,21-,22+/m0/s1 | ||
Molecular Formula: C30H42O5 | Mol. Weight: 482.6515 | Heavy Atoms: 35 |
Charge: 0 | Is Chiral: True | logP: 7.3798 |
HBD: 1 | HBA: 5 | TPSA: 68.9 |
#Bonds: 40 | #Rotatable Bonds: 11 | Shape Complexity: 0.5 |
Stereocomplexity: 0.13333334 | Ligand Type: Small Molecule |
Binding Affinity |
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