PDB Entry (6sz1) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6sz1 | Resolution: 1.75 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32101404 | DOI: 10.1021/acschembio.9b00894 | |
Protein |
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Protein Name: YTH domain-containing protein 1 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q96MU7 (YTDC1_HUMAN) | Organism: Homo sapiens |
Gene Symbol: YTHDC1 | Gene ID: 91746 |
Pocket Descriptors | |
Volume: 266.176 | Depth: 12.8623 |
Hydrophobicity: 0.72093 | Drug Score: 0.289426 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: ~{N}-methylquinazolin-4-amine | ||
HET ID: M0W | PubChem: 252220 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CNc1ncnc2c1cccc2 | ||
Standard InChI: InChI=1S/C9H9N3/c1-10-9-7-4-2-3-5-8(7)11-6-12-9/h2-6H,1H3,(H,10,11,12) | ||
Molecular Formula: C9H9N3 | Mol. Weight: 159.18787 | Heavy Atoms: 12 |
Charge: 0 | Is Chiral: False | logP: 1.7445 |
HBD: 1 | HBA: 3 | TPSA: 37.81 |
#Bonds: 13 | #Rotatable Bonds: 1 | Shape Complexity: 0.11111111 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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