PDB Entry (5r58) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 5r58 | Resolution: 1.98 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
|
Protein Name: Uridine diphosphate glucose pyrophosphatase NUDT22 | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: Q9BRQ3 (NUD22_HUMAN) | Organism: Homo sapiens |
Gene Symbol: NUDT22 | Gene ID: 84304 |
Pocket Descriptors | |
Volume: 457.472 | Depth: 16.3707 |
Hydrophobicity: 0.754545 | Drug Score: 0.428921 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: (3~{R},4~{R})-1,1-bis(oxidanylidene)-4-(pyridin-3-ylmethylamino)thiolan-3-ol | ||
HET ID: S0S | PubChem: 1201335 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: O[C@H]1CS(=O)(=O)C[C@@H]1NCc1cccnc1 | ||
Standard InChI: InChI=1S/C10H14N2O3S/c13-10-7-16(14,15)6-9(10)12-5-8-2-1-3-11-4-8/h1-4,9-10,12-13H,5-7H2/t9-,10-/m0/s1 | ||
Molecular Formula: C10H14N2O3S | Mol. Weight: 242.29475 | Heavy Atoms: 16 |
Charge: 0 | Is Chiral: True | logP: 0.8008 |
HBD: 2 | HBA: 5 | TPSA: 87.67 |
#Bonds: 19 | #Rotatable Bonds: 3 | Shape Complexity: 0.5 |
Stereocomplexity: 0.2 | Ligand Type: Small Molecule |
Binding Affinity |
||
- |