PDB Entry (5r54) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5r54 | Resolution: 1.79 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
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Protein Name: Uridine diphosphate glucose pyrophosphatase NUDT22 | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: Q9BRQ3 (NUD22_HUMAN) | Organism: Homo sapiens |
Gene Symbol: NUDT22 | Gene ID: 84304 |
Pocket Descriptors | |
Volume: 1006.66 | Depth: 26.7283 |
Hydrophobicity: 0.620853 | Drug Score: 0.361045 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 4-(benzimidazol-1-ylmethyl)benzenecarbonitrile | ||
HET ID: RYM | PubChem: 863558 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: N#Cc1ccc(cc1)Cn1cnc2c1cccc2 | ||
Standard InChI: InChI=1S/C15H11N3/c16-9-12-5-7-13(8-6-12)10-18-11-17-14-3-1-2-4-15(14)18/h1-8,11H,10H2 | ||
Molecular Formula: C15H11N3 | Mol. Weight: 233.26794 | Heavy Atoms: 18 |
Charge: 0 | Is Chiral: False | logP: 2.95628 |
HBD: 0 | HBA: 3 | TPSA: 41.61 |
#Bonds: 20 | #Rotatable Bonds: 2 | Shape Complexity: 0.071428575 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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