PDB Entry (5r5d) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5r5d | Resolution: 1.65 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: None | |
Protein |
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Protein Name: Uridine diphosphate glucose pyrophosphatase NUDT22 | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: Q9BRQ3 (NUD22_HUMAN) | Organism: Homo sapiens |
Gene Symbol: NUDT22 | Gene ID: 84304 |
Pocket Descriptors | |
Volume: 1339.33 | Depth: 23.4231 |
Hydrophobicity: 0.667939 | Drug Score: 0.773089 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 3-azanyl-4-(pyridin-3-ylmethylamino)benzoic acid | ||
HET ID: S1J | PubChem: 808765 | |
DrugBank: - | ChEMBL: CHEMBL242279 | |
Canonical SMILES: Nc1cc(ccc1NCc1cccnc1)C(=O)O | ||
Standard InChI: InChI=1S/C13H13N3O2/c14-11-6-10(13(17)18)3-4-12(11)16-8-9-2-1-5-15-7-9/h1-7,16H,8,14H2,(H,17,18) | ||
Molecular Formula: C13H13N3O2 | Mol. Weight: 243.26122 | Heavy Atoms: 18 |
Charge: 0 | Is Chiral: False | logP: 2.6283 |
HBD: 3 | HBA: 5 | TPSA: 88.24 |
#Bonds: 19 | #Rotatable Bonds: 4 | Shape Complexity: 0.07692308 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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