PDB Entry (6x4a)

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Visualizer: MichelaNGLo

PDB ID: 6x4a Resolution: 2.54 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32643196 DOI: 10.1002/pro.3910
Protein
Protein Name: Gag-Pol polyprotein
Protein Class: VIRAL PROTEIN
Uniprot ID/ACC: P03366 (POL_HV1B1) Organism: Human immunodeficiency virus type 1 group M subtype B
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 297.472 Depth: 27.2201
Hydrophobicity: 0.770588 Drug Score: 0.0189727
Pocket Similarity: Calculate
Ligand
Ligand Name:   5-chloro-7-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-8-methyl-2-naphthonitrile
HET ID:   7AY PubChem:   123132914
DrugBank:   - ChEMBL:   CHEMBL3937452
Canonical SMILES:   N#Cc1ccc2c(c1)c(C)c(cc2Cl)Oc1ccccc1OCCn1ccc(=O)[nH]c1=O
Standard InChI:   InChI=1S/C24H18ClN3O4/c1-15-18-12-16(14-26)6-7-17(18)19(25)13-22(15)32-21-5-3-2-4-20(21)31-11-10-28-9-8-23(29)27-24(28)30/h2-9,12-13H,10-11H2,1H3,(H,27,29,30)
Molecular Formula:   C24H18ClN3O4 Mol. Weight:   447.87042 Heavy Atoms:   32
Charge:   0 Is Chiral:   False logP:   4.39458
HBD:   1 HBA:   6 TPSA:   97.11
#Bonds:   36 #Rotatable Bonds:   6 Shape Complexity:   0.13043478
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-