PDB Entry (6smg)

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Visualizer: MichelaNGLo

PDB ID: 6smg Resolution: 3.5 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31911601 DOI: 10.1038/s41467-019-13936-2
Protein
Protein Name: Genome polyprotein
Protein Class: VIRAL PROTEIN
Uniprot ID/ACC: Q9QF31 (POLG_CX16T) Organism: Coxsackievirus A16
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 573.632 Depth: 47.0264
Hydrophobicity: 0.739362 Drug Score: 0.0754419
Pocket Similarity: Calculate
Ligand
Ligand Name:   SPHINGOSINE
HET ID:   SPH PubChem:   444299
DrugBank:   - ChEMBL:   -
Canonical SMILES:   CCCCCCCCCCCCCC=CC(C(CO)N)O
Standard InChI:   InChI=1S/C18H37NO2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(21)17(19)16-20/h14-15,17-18,20-21H,2-13,16,19H2,1H3
Molecular Formula:   C18H37NO2 Mol. Weight:   299.49188 Heavy Atoms:   21
Charge:   0 Is Chiral:   True logP:   4.6245
HBD:   3 HBA:   3 TPSA:   66.48
#Bonds:   20 #Rotatable Bonds:   15 Shape Complexity:   0.8888889
Stereocomplexity:   0.11111111 Ligand Type:   Small Molecule
Binding Affinity
-