PDB Entry (6lhq)

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Visualizer: MichelaNGLo

PDB ID: 6lhq Resolution: 3.06 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32027857 DOI: 10.1016/j.chom.2020.01.003
Protein
Protein Name: Genome polyprotein
Protein Class: VIRAL PROTEIN
Uniprot ID/ACC: Q9QF31 (POLG_CX16T) Organism: Coxsackievirus A16
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 723.264 Depth: 41.6913
Hydrophobicity: 0.70045 Drug Score: 0.399914
Pocket Similarity: Calculate
Ligand
Ligand Name:   SPHINGOSINE
HET ID:   SPH PubChem:   444299
DrugBank:   - ChEMBL:   -
Canonical SMILES:   CCCCCCCCCCCCCC=CC(C(CO)N)O
Standard InChI:   InChI=1S/C18H37NO2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(21)17(19)16-20/h14-15,17-18,20-21H,2-13,16,19H2,1H3
Molecular Formula:   C18H37NO2 Mol. Weight:   299.49188 Heavy Atoms:   21
Charge:   0 Is Chiral:   True logP:   4.6245
HBD:   3 HBA:   3 TPSA:   66.48
#Bonds:   20 #Rotatable Bonds:   15 Shape Complexity:   0.8888889
Stereocomplexity:   0.11111111 Ligand Type:   Small Molecule
Binding Affinity
-