PDB Entry (6lhp) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6lhp | Resolution: 3.3 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32027857 | DOI: 10.1016/j.chom.2020.01.003 | |
Protein |
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Protein Name: Genome polyprotein | |
Protein Class: VIRAL PROTEIN | |
Uniprot ID/ACC: Q9QF31 (POLG_CX16T) | Organism: Coxsackievirus A16 |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 613.248 | Depth: 37.9389 |
Hydrophobicity: 0.732759 | Drug Score: 0.168832 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: SPHINGOSINE | ||
HET ID: SPH | PubChem: 444299 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CCCCCCCCCCCCCC=CC(C(CO)N)O | ||
Standard InChI: InChI=1S/C18H37NO2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(21)17(19)16-20/h14-15,17-18,20-21H,2-13,16,19H2,1H3 | ||
Molecular Formula: C18H37NO2 | Mol. Weight: 299.49188 | Heavy Atoms: 21 |
Charge: 0 | Is Chiral: True | logP: 4.6245 |
HBD: 3 | HBA: 3 | TPSA: 66.48 |
#Bonds: 20 | #Rotatable Bonds: 15 | Shape Complexity: 0.8888889 |
Stereocomplexity: 0.11111111 | Ligand Type: Small Molecule |
Binding Affinity |
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