PDB Entry (6tg9)

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PDB ID: 6tg9 Resolution: 3.24 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32313256 DOI: 10.1038/s41467-020-15614-0
Protein
Protein Name: Formate dehydrogenase
Protein Class: OXIDOREDUCTASE
Uniprot ID/ACC: D5AQH0 (D5AQH0_RHOCB) Organism: Rhodobacter capsulatus
Gene Symbol: - Gene ID: 31491827
Pocket Descriptors
Volume: 332.416 Depth: 38.9954
Hydrophobicity: 0.666667 Drug Score: 0.0158027
Pocket Similarity: Calculate
Ligand
Ligand Name:   2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
HET ID:   MGD PubChem:   135398583, 5326487
DrugBank:   - ChEMBL:   CHEMBL1234296
Canonical SMILES:   Nc1nc2N[C@@H]3O[C@H](CO[P@@](=O)(O[P@@](=O)(OC[C@H]4O[C@H]([C@@H]([C@@H]4O)O)n4cnc5c4nc(N)[nH]c5=O)O)O)C(=C([C@@H]3Nc2c(=O)[nH]1)S)S
Standard InChI:   InChI=1S/C20H26N10O13P2S2/c21-19-26-13-7(15(33)28-19)24-6-12(47)11(46)5(41-17(6)25-13)2-40-45(37,38)43-44(35,36)39-1-4-9(31)10(32)18(42-4)30-3-23-8-14(30)27-20(22)29-16(8)34/h3-6,9-10,17-18,24,31-32,46-47H,1-2H2,(H,35,36)(H,37,38)(H3,22,27,29,34)(H4,21,25,26,28,33)/t4-,5-,6+,9-,10-,17-,18-/m1/s1
Molecular Formula:   C20H26N10O13P2S2 Mol. Weight:   740.5572 Heavy Atoms:   47
Charge:   0 Is Chiral:   True logP:   -0.6222
HBD:   12 HBA:   23 TPSA:   443.85
#Bonds:   61 #Rotatable Bonds:   9 Shape Complexity:   0.45
Stereocomplexity:   0.45 Ligand Type:   Small Molecule
Binding Affinity
-