PDB Entry (6us2) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 6us2 | Resolution: 1.8 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32184970 | DOI: 10.1021/acsmedchemlett.9b00420 | |
Protein |
|
Protein Name: 7,8-dihydro-8-oxoguanine triphosphatase | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P36639 (8ODP_HUMAN) | Organism: Homo sapiens |
Gene Symbol: NUDT1 | Gene ID: 4521 |
Pocket Descriptors | |
Volume: 692.928 | Depth: 22.4642 |
Hydrophobicity: 0.764706 | Drug Score: 0.752043 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: N-[5-(2,3-dimethylphenyl)-1,2,3,4-tetrahydro-1,6-naphthyridin-7-yl]acetamide | ||
HET ID: S3O | PubChem: 146018719 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CC(=O)Nc1cc2NCCCc2c(n1)c1cccc(c1C)C | ||
Standard InChI: InChI=1S/C18H21N3O/c1-11-6-4-7-14(12(11)2)18-15-8-5-9-19-16(15)10-17(21-18)20-13(3)22/h4,6-7,10,19H,5,8-9H2,1-3H3,(H,20,21,22) | ||
Molecular Formula: C18H21N3O | Mol. Weight: 295.37885 | Heavy Atoms: 22 |
Charge: 0 | Is Chiral: False | logP: 3.8929 |
HBD: 2 | HBA: 4 | TPSA: 54.02 |
#Bonds: 24 | #Rotatable Bonds: 3 | Shape Complexity: 0.33333334 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
||
- |