PDB Entry (6ynm)

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PDB ID: 6ynm Resolution: 1.5 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: YTH domain-containing protein 1
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q96MU7 (YTDC1_HUMAN) Organism: Homo sapiens
Gene Symbol: YTHDC1 Gene ID: 91746
Pocket Descriptors
Volume: 595.712 Depth: 12.687
Hydrophobicity: 0.713043 Drug Score: 0.803923
Pocket Similarity: Calculate
Ligand
Ligand Name:   1-[(2~{R},5~{S})-2-(3-chlorophenyl)-5-methyl-morpholin-4-yl]-3-methoxy-propan-2-ol
HET ID:   P1Q PubChem:   39242981
DrugBank:   - ChEMBL:   -
Canonical SMILES:   C[C@H]1CO[C@@H](CN1)c1cccc(c1)Cl
Standard InChI:   InChI=1S/C11H14ClNO/c1-8-7-14-11(6-13-8)9-3-2-4-10(12)5-9/h2-5,8,11,13H,6-7H2,1H3/t8-,11-/m0/s1
Molecular Formula:   C11H14ClNO Mol. Weight:   211.68796 Heavy Atoms:   14
Charge:   0 Is Chiral:   True logP:   2.7182
HBD:   1 HBA:   2 TPSA:   21.26
#Bonds:   17 #Rotatable Bonds:   1 Shape Complexity:   0.45454547
Stereocomplexity:   0.18181819 Ligand Type:   Small Molecule
Binding Affinity
-