PDB Entry (6yni)

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PDB ID: 6yni Resolution: 1.36 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: YTH domain-containing protein 1
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q96MU7 (YTDC1_HUMAN) Organism: Homo sapiens
Gene Symbol: YTHDC1 Gene ID: 91746
Pocket Descriptors
Volume: 600.0 Depth: 11.9063
Hydrophobicity: 0.722222 Drug Score: 0.914947
Pocket Similarity: Calculate
Ligand
Ligand Name:   (2~{R},3~{R})-2-(3-chlorophenyl)-3,5,5-trimethyl-morpholine
HET ID:   P0Q PubChem:   51349454
DrugBank:   - ChEMBL:   -
Canonical SMILES:   C[C@H]1NC(C)(C)CO[C@@H]1c1cccc(c1)Cl
Standard InChI:   InChI=1S/C13H18ClNO/c1-9-12(16-8-13(2,3)15-9)10-5-4-6-11(14)7-10/h4-7,9,12,15H,8H2,1-3H3/t9-,12+/m1/s1
Molecular Formula:   C13H18ClNO Mol. Weight:   239.74112 Heavy Atoms:   16
Charge:   0 Is Chiral:   True logP:   3.4968
HBD:   1 HBA:   2 TPSA:   21.26
#Bonds:   19 #Rotatable Bonds:   1 Shape Complexity:   0.53846157
Stereocomplexity:   0.15384616 Ligand Type:   Small Molecule
Binding Affinity
-