PDB Entry (6t0z)

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Visualizer: MichelaNGLo

PDB ID: 6t0z Resolution: 1.94 Å Exp. Method: X-RAY DIFFRACTION
PMID: 33058974 DOI: 10.1016/j.ijbiomac.2020.10.025
Protein
Protein Name: YTH domain-containing protein 1
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q96MU7 (YTDC1_HUMAN) Organism: Homo sapiens
Gene Symbol: YTHDC1 Gene ID: 91746
Pocket Descriptors
Volume: 684.928 Depth: 22.4891
Hydrophobicity: 0.701087 Drug Score: 0.384434
Pocket Similarity: Calculate
Ligand
Ligand Name:   ~{N}-cyclopropyl-1~{H}-imidazole-4-sulfonamide
HET ID:   M75 PubChem:   54593460
DrugBank:   - ChEMBL:   -
Canonical SMILES:   O=S(=O)(c1nc[nH]c1)NC1CC1
Standard InChI:   InChI=1S/C6H9N3O2S/c10-12(11,9-5-1-2-5)6-3-7-4-8-6/h3-5,9H,1-2H2,(H,7,8)
Molecular Formula:   C6H9N3O2S Mol. Weight:   187.21956 Heavy Atoms:   12
Charge:   0 Is Chiral:   False logP:   1.3221
HBD:   2 HBA:   4 TPSA:   83.23
#Bonds:   14 #Rotatable Bonds:   3 Shape Complexity:   0.5
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-