PDB Entry (6jf0) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 6jf0 | Resolution: 3.4 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31991094 | DOI: 10.1016/j.chembiol.2020.01.006 | |
Protein |
|
Protein Name: Peroxisome proliferator-activated receptor gamma | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P37231 (PPARG_HUMAN) | Organism: Homo sapiens |
Gene Symbol: PPARG | Gene ID: 5468 |
Pocket Descriptors | |
Volume: 1350.85 | Depth: 35.3635 |
Hydrophobicity: 0.732227 | Drug Score: 0.99166 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: methyl (2~{S})-3-[4-[3-(4-methoxy-2-oxidanyl-phenyl)prop-2-ynoyloxy]phenyl]-2-[[2-(phenylcarbonyl)phenyl]amino]propanoate | ||
HET ID: EB6 | PubChem: 145915876 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: COC(=O)[C@@H](Nc1ccccc1C(=O)c1ccccc1)Cc1ccc(cc1)OC(=O)C#Cc1ccc(cc1O)OC | ||
Standard InChI: InChI=1S/C33H27NO7/c1-39-26-18-14-23(30(35)21-26)15-19-31(36)41-25-16-12-22(13-17-25)20-29(33(38)40-2)34-28-11-7-6-10-27(28)32(37)24-8-4-3-5-9-24/h3-14,16-18,21,29,34-35H,20H2,1-2H3/t29-/m0/s1 | ||
Molecular Formula: C33H27NO7 | Mol. Weight: 549.57 | Heavy Atoms: 41 |
Charge: 0 | Is Chiral: True | logP: 4.8581 |
HBD: 2 | HBA: 8 | TPSA: 111.16 |
#Bonds: 45 | #Rotatable Bonds: 11 | Shape Complexity: 0.12903225 |
Stereocomplexity: 0.030303031 | Ligand Type: Small Molecule |
Binding Affinity |
||
- |