PDB Entry (6jgr)

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Visualizer: MichelaNGLo

PDB ID: 6jgr Resolution: 2.25 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: None
Protein
Protein Name: barley exohydrolaseI W434F mutant
Protein Class: HYDROLASE
Uniprot ID/ACC: A0A287SCR5 (A0A287SCR5_HORVV) Organism: Hordeum vulgare
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 552.064 Depth: 24.5265
Hydrophobicity: 0.724576 Drug Score: 0.126409
Pocket Similarity: Calculate
Ligand
Ligand Name:   4'-NITROPHENYL-S-(BETA-D-GLUCOPYRANOSYL)-(1-3)-(3-THIO-BETA-D-GLUCOPYRANOSYL)-(1-3)-BETA-D-GLUCOPYRANOSIDE
HET ID:   LAM PubChem:   131704265
DrugBank:   DB03990 ChEMBL:   -
Canonical SMILES:   OCC1OC(Oc2ccc(cc2)[N+](=O)[O-])C(C(C1O)O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)S[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)O)O
Standard InChI:   InChI=1S/C24H35NO17S/c26-5-10-13(29)16(32)17(33)24(41-10)43-21-15(31)12(7-28)40-23(19(21)35)42-20-14(30)11(6-27)39-22(18(20)34)38-9-3-1-8(2-4-9)25(36)37/h1-4,10-24,26-35H,5-7H2/t10-,11?,12-,13-,14?,15-,16+,17-,18?,19-,20?,21+,22?,23+,24+/m1/s1
Molecular Formula:   C24H35NO17S Mol. Weight:   641.5962 Heavy Atoms:   43
Charge:   0 Is Chiral:   True logP:   -4.3383
HBD:   10 HBA:   16 TPSA:   319.57
#Bonds:   56 #Rotatable Bonds:   10 Shape Complexity:   0.75
Stereocomplexity:   0.625 Ligand Type:   Small Molecule
Binding Affinity
-