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PDB Entry (5z53) Download |
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Visualizer: MichelaNGLo |
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| PDB ID: 5z53 | Resolution: 1.86 Å | Exp. Method: X-RAY DIFFRACTION |
| PMID: 30222239 | DOI: 10.1002/anie.201808231 | |
Protein |
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| Protein Name: 12-epi-hapalindole U synthase | |
| Protein Class: TRANSFERASE | |
| Uniprot ID/ACC: A0A1P8VSI6 (A0A1P8VSI6_9CYAN) | Organism: Fischerella |
| Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
| Volume: 729.664 | Depth: 23.6254 |
| Hydrophobicity: 0.718615 | Drug Score: 0.507474 |
| Pocket Similarity: Calculate | |
Ligand |
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| Ligand Name: amino({3-[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]propyl}amino)methaniminium | ||
| HET ID: 0HZ | PubChem: 137347862 | |
| DrugBank: - | ChEMBL: - | |
| Canonical SMILES: O=C1N[C@@H](CCCNC(=[NH2+])N)C(=O)N2[C@@H]1CCC2 | ||
| Standard InChI: InChI=1S/C11H19N5O2/c12-11(13)14-5-1-3-7-10(18)16-6-2-4-8(16)9(17)15-7/h7-8H,1-6H2,(H,15,17)(H4,12,13,14)/p+1/t7-,8+/m0/s1 | ||
| Molecular Formula: C11H20N5O2+ | Mol. Weight: 254.3088 | Heavy Atoms: 18 |
| Charge: 1 | Is Chiral: True | logP: -1.7227 |
| HBD: 4 | HBA: 6 | TPSA: 113.05 |
| #Bonds: 23 | #Rotatable Bonds: 5 | Shape Complexity: 0.72727275 |
| Stereocomplexity: 0.18181819 | Ligand Type: Small Molecule | |
Binding Affinity |
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