PDB Entry (6ugl)

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Visualizer: MichelaNGLo

PDB ID: 6ugl Resolution: 2.03 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31964715 DOI: 10.1074/jbc.RA119.012104
Protein
Protein Name: Helix-turn-helix transcriptional regulator
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: A0A0F0AZW0 (A0A0F0AZW0_VIBCL) Organism: Vibrio cholerae
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 272.128 Depth: 9.80612
Hydrophobicity: 0.752809 Drug Score: 0.453504
Pocket Similarity: Calculate
Ligand
Ligand Name:   3,5-dimethylpyrazin-2(1H)-one
HET ID:   QOS PubChem:   13123639
DrugBank:   - ChEMBL:   -
Canonical SMILES:   Cc1nc(C)c[nH]c1=O
Standard InChI:   InChI=1S/C6H8N2O/c1-4-3-7-6(9)5(2)8-4/h3H,1-2H3,(H,7,9)
Molecular Formula:   C6H8N2O Mol. Weight:   124.14052 Heavy Atoms:   9
Charge:   0 Is Chiral:   False logP:   0.3867
HBD:   1 HBA:   2 TPSA:   45.75
#Bonds:   10 #Rotatable Bonds:   0 Shape Complexity:   0.33333334
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-