PDB Entry (6ugl) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6ugl | Resolution: 2.03 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31964715 | DOI: 10.1074/jbc.RA119.012104 | |
Protein |
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Protein Name: Helix-turn-helix transcriptional regulator | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: A0A0F0AZW0 (A0A0F0AZW0_VIBCL) | Organism: Vibrio cholerae |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 272.128 | Depth: 9.80612 |
Hydrophobicity: 0.752809 | Drug Score: 0.453504 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 3,5-dimethylpyrazin-2(1H)-one | ||
HET ID: QOS | PubChem: 13123639 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: Cc1nc(C)c[nH]c1=O | ||
Standard InChI: InChI=1S/C6H8N2O/c1-4-3-7-6(9)5(2)8-4/h3H,1-2H3,(H,7,9) | ||
Molecular Formula: C6H8N2O | Mol. Weight: 124.14052 | Heavy Atoms: 9 |
Charge: 0 | Is Chiral: False | logP: 0.3867 |
HBD: 1 | HBA: 2 | TPSA: 45.75 |
#Bonds: 10 | #Rotatable Bonds: 0 | Shape Complexity: 0.33333334 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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