PDB Entry (1p0y) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1p0y | Resolution: 2.55 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 12819771 | DOI: 10.1038/nsb946 | |
Protein |
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Protein Name: Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q43088 (RBCMT_PEA) | Organism: Pisum sativum |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 450.688 | Depth: 39.9623 |
Hydrophobicity: 0.69161 | Drug Score: 0.0310898 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: N-METHYL-LYSINE | ||
HET ID: MLZ | PubChem: 164795 | |
DrugBank: DB01714 | ChEMBL: CHEMBL1234366 | |
Canonical SMILES: CNCCCC[C@@H](C(=O)O)N | ||
Standard InChI: InChI=1S/C7H16N2O2/c1-9-5-3-2-4-6(8)7(10)11/h6,9H,2-5,8H2,1H3,(H,10,11)/t6-/m0/s1 | ||
Molecular Formula: C7H16N2O2 | Mol. Weight: 160.21414 | Heavy Atoms: 11 |
Charge: 0 | Is Chiral: True | logP: 0.8792 |
HBD: 3 | HBA: 4 | TPSA: 75.35 |
#Bonds: 11 | #Rotatable Bonds: 6 | Shape Complexity: 0.85714287 |
Stereocomplexity: 0.14285715 | Ligand Type: Small Molecule |
Binding Affinity |
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