PDB Entry (4mzf) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 4mzf | Resolution: 2.1 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 24589551 | DOI: 10.1101/gad.233239.113 | |
Protein |
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Protein Name: Spindlin-1 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q9Y657 (SPIN1_HUMAN) | Organism: Homo sapiens |
Gene Symbol: SPIN1 | Gene ID: 10927 |
Pocket Descriptors | |
Volume: 170.24 | Depth: 9.54987 |
Hydrophobicity: 0.762712 | Drug Score: 0.152072 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: NG,NG-DIMETHYL-L-ARGININE | ||
HET ID: DA2 | PubChem: 123831 | |
DrugBank: DB01686 | ChEMBL: CHEMBL457530 | |
Canonical SMILES: OC(=O)[C@H](CCCNC(=N)N(C)C)N | ||
Standard InChI: InChI=1S/C8H18N4O2/c1-12(2)8(10)11-5-3-4-6(9)7(13)14/h6H,3-5,9H2,1-2H3,(H2,10,11)(H,13,14)/t6-/m0/s1 | ||
Molecular Formula: C8H18N4O2 | Mol. Weight: 202.25412 | Heavy Atoms: 14 |
Charge: 0 | Is Chiral: True | logP: 0.4554 |
HBD: 4 | HBA: 6 | TPSA: 102.44 |
#Bonds: 14 | #Rotatable Bonds: 7 | Shape Complexity: 0.75 |
Stereocomplexity: 0.125 | Ligand Type: H3K4me3R8me2a |
Binding Affinity |
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