PDB Entry (6pzr) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 6pzr | Resolution: 2.3 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31793776 | DOI: 10.1021/acs.jmedchem.9b01540 | |
Protein |
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Protein Name: Histone deacetylase 6 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: F8W4B7 (F8W4B7_DANRE) | Organism: Danio rerio |
Gene Symbol: hdac6 | Gene ID: 565482 |
Pocket Descriptors | |
Volume: 153.024 | Depth: 13.2919 |
Hydrophobicity: 0.763636 | Drug Score: 0.444519 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: Resminostat | ||
HET ID: P7D | PubChem: 11609955 | |
DrugBank: DB12392 | ChEMBL: CHEMBL4296717 | |
Canonical SMILES: ONC(=O)/C=C/c1ccn(c1)S(=O)(=O)c1ccc(cc1)CN(C)C | ||
Standard InChI: InChI=1S/C16H19N3O4S/c1-18(2)11-13-3-6-15(7-4-13)24(22,23)19-10-9-14(12-19)5-8-16(20)17-21/h3-10,12,21H,11H2,1-2H3,(H,17,20)/b8-5+ | ||
Molecular Formula: C16H19N3O4S | Mol. Weight: 349.40475 | Heavy Atoms: 24 |
Charge: 0 | Is Chiral: False | logP: 2.777 |
HBD: 2 | HBA: 7 | TPSA: 100.02 |
#Bonds: 25 | #Rotatable Bonds: 7 | Shape Complexity: 0.1875 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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