PDB Entry (6pzr)

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Visualizer: MichelaNGLo

PDB ID: 6pzr Resolution: 2.3 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31793776 DOI: 10.1021/acs.jmedchem.9b01540
Protein
Protein Name: Histone deacetylase 6
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: F8W4B7 (F8W4B7_DANRE) Organism: Danio rerio
Gene Symbol: hdac6 Gene ID: 565482
Pocket Descriptors
Volume: 153.024 Depth: 13.2919
Hydrophobicity: 0.763636 Drug Score: 0.444519
Pocket Similarity: Calculate
Ligand
Ligand Name:   Resminostat
HET ID:   P7D PubChem:   11609955
DrugBank:   DB12392 ChEMBL:   CHEMBL4296717
Canonical SMILES:   ONC(=O)/C=C/c1ccn(c1)S(=O)(=O)c1ccc(cc1)CN(C)C
Standard InChI:   InChI=1S/C16H19N3O4S/c1-18(2)11-13-3-6-15(7-4-13)24(22,23)19-10-9-14(12-19)5-8-16(20)17-21/h3-10,12,21H,11H2,1-2H3,(H,17,20)/b8-5+
Molecular Formula:   C16H19N3O4S Mol. Weight:   349.40475 Heavy Atoms:   24
Charge:   0 Is Chiral:   False logP:   2.777
HBD:   2 HBA:   7 TPSA:   100.02
#Bonds:   25 #Rotatable Bonds:   7 Shape Complexity:   0.1875
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
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