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PDB Entry (6snd) Download |
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Visualizer: MichelaNGLo |
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| PDB ID: 6snd | Resolution: 3.1 Å | Exp. Method: X-RAY DIFFRACTION |
| PMID: 31653484 | DOI: 10.1016/j.chom.2019.09.016 | |
Protein |
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| Protein Name: LN01 light chain | |
| Protein Class: ANTIBODY | |
| Uniprot ID/ACC: - | Organism: Homo sapiens |
| Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
| Volume: 415.616 | Depth: 23.9477 |
| Hydrophobicity: 0.712644 | Drug Score: 0.0808682 |
| Pocket Similarity: Calculate | |
Ligand |
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| Ligand Name: PHOSPHOCHOLINE | ||
| HET ID: PC | PubChem: 1014 | |
| DrugBank: DB03945 | ChEMBL: CHEMBL1235161 | |
| Canonical SMILES: OP(=O)(OCC[N+](C)(C)C)O | ||
| Standard InChI: InChI=1S/C5H14NO4P/c1-6(2,3)4-5-10-11(7,8)9/h4-5H2,1-3H3,(H-,7,8,9)/p+1 | ||
| Molecular Formula: C5H15NO4P+ | Mol. Weight: 184.15067 | Heavy Atoms: 11 |
| Charge: 1 | Is Chiral: False | logP: -0.1981 |
| HBD: 2 | HBA: 4 | TPSA: 76.57 |
| #Bonds: 10 | #Rotatable Bonds: 4 | Shape Complexity: 1.0 |
| Stereocomplexity: 0.0 | Ligand Type: Small Molecule | |
Binding Affinity |
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