PDB Entry (1q0y)

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Visualizer: MichelaNGLo

PDB ID: 1q0y Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 15019787 DOI: 10.1016/j.jmb.2003.12.084
Protein
Protein Name: Ig lambda-1 chain V regions MOPC 104E/RPC20/J558/S104
Protein Class: ANTIBODY
Uniprot ID/ACC: P01724 (LV1B_MOUSE) Organism: Mus musculus
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 282.368 Depth: 13.1332
Hydrophobicity: 0.770833 Drug Score: 0.388309
Pocket Similarity: Calculate
Ligand
Ligand Name:   (7R,7AS,12BS)-3-METHYL-2,3,4,4A,7,7A-HEXAHYDRO-1H-4,12-METHANO[1]BENZOFURO[3,2-E]ISOQUINOLINE-7,9-DIOL
HET ID:   MOI PubChem:   5288826
DrugBank:   DB00295 ChEMBL:   CHEMBL70
Canonical SMILES:   O[C@H]1C=C[C@@H]2[C@@]34[C@H]1Oc1c4c(C[C@H]2N(CC3)C)ccc1O
Standard InChI:   InChI=1S/C17H19NO3/c1-18-7-6-17-10-3-5-13(20)16(17)21-15-12(19)4-2-9(14(15)17)8-11(10)18/h2-5,10-11,13,16,19-20H,6-8H2,1H3/t10-,11+,13-,16-,17-/m0/s1
Molecular Formula:   C17H19NO3 Mol. Weight:   285.33765 Heavy Atoms:   21
Charge:   0 Is Chiral:   True logP:   1.136
HBD:   2 HBA:   4 TPSA:   52.93
#Bonds:   29 #Rotatable Bonds:   0 Shape Complexity:   0.5294118
Stereocomplexity:   0.29411766 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
Binding MOAD Kd : 1 nM