PDB Entry (1q72)

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Visualizer: MichelaNGLo

PDB ID: 1q72 Resolution: 1.7 Å Exp. Method: X-RAY DIFFRACTION
PMID: 15885702 DOI: 10.1016/j.jmb.2005.03.080
Protein
Protein Name: Light Chain of Fab M82G2
Protein Class: ANTIBODY
Uniprot ID/ACC: - Organism: Mus musculus
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 462.016 Depth: 14.4966
Hydrophobicity: 0.674699 Drug Score: 0.0536061
Pocket Similarity: Calculate
Ligand
Ligand Name:   COCAINE
HET ID:   COC PubChem:   446220
DrugBank:   DB00907 ChEMBL:   CHEMBL370805
Canonical SMILES:   COC(=O)[C@H]1[C@H](C[C@H]2N([C@@H]1CC2)C)OC(=O)c1ccccc1
Standard InChI:   InChI=1S/C17H21NO4/c1-18-12-8-9-13(18)15(17(20)21-2)14(10-12)22-16(19)11-6-4-3-5-7-11/h3-7,12-15H,8-10H2,1-2H3/t12-,13+,14-,15+/m0/s1
Molecular Formula:   C17H21NO4 Mol. Weight:   303.35294 Heavy Atoms:   22
Charge:   0 Is Chiral:   True logP:   1.8056
HBD:   0 HBA:   5 TPSA:   55.84
#Bonds:   28 #Rotatable Bonds:   5 Shape Complexity:   0.5294118
Stereocomplexity:   0.23529412 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Kd : 140 nM
Binding MOAD Kd : 1450 nM