PDB Entry (4lar) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 4lar | Resolution: 2.38 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 24349338 | DOI: 10.1371/journal.pone.0082690 | |
Protein |
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Protein Name: Single chain antibody fragment scFv6H4 | |
Protein Class: ANTIBODY | |
Uniprot ID/ACC: - | Organism: Mus musculus |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 373.056 | Depth: 14.1195 |
Hydrophobicity: 0.785714 | Drug Score: 0.761063 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (2S)-1-phenylpropan-2-amine | ||
HET ID: 1WE | PubChem: 5826 | |
DrugBank: DB00182 | ChEMBL: CHEMBL612 | |
Canonical SMILES: C[C@@H](Cc1ccccc1)N | ||
Standard InChI: InChI=1S/C9H13N/c1-8(10)7-9-5-3-2-4-6-9/h2-6,8H,7,10H2,1H3/t8-/m0/s1 | ||
Molecular Formula: C9H13N | Mol. Weight: 135.20622 | Heavy Atoms: 10 |
Charge: 0 | Is Chiral: True | logP: 2.2766 |
HBD: 1 | HBA: 1 | TPSA: 26.02 |
#Bonds: 11 | #Rotatable Bonds: 2 | Shape Complexity: 0.33333334 |
Stereocomplexity: 0.11111111 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | Kd : 20700 nM |