PDB Entry (3b7q) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 3b7q | Resolution: 2.03 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 18243114 | DOI: 10.1016/j.molcel.2007.11.026 | |
Protein |
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Protein Name: CRAL-TRIO domain-containing protein YKL091C | |
Protein Class: SIGNALING PROTEIN | |
Uniprot ID/ACC: P33324 (YKJ1_YEAST) | Organism: Saccharomyces cerevisiae |
Gene Symbol: - | Gene ID: 853771 |
Pocket Descriptors | |
Volume: 1604.54 | Depth: 37.8527 |
Hydrophobicity: 0.704225 | Drug Score: 0.998549 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE | ||
HET ID: 6PL | PubChem: 449006 | |
DrugBank: - | ChEMBL: CHEMBL1230515 | |
Canonical SMILES: CCCCCCCCCCCCCCCCCC(=O)O[C@@H](CO[P@](=O)(OCC[N+](C)(C)C)O)COC(=O)CCCCCCCCCCCCCCC | ||
Standard InChI: InChI=1S/C42H84NO8P/c1-6-8-10-12-14-16-18-20-21-23-25-27-29-31-33-35-42(45)51-40(39-50-52(46,47)49-37-36-43(3,4)5)38-48-41(44)34-32-30-28-26-24-22-19-17-15-13-11-9-7-2/h40H,6-39H2,1-5H3/p+1/t40-/m1/s1 | ||
Molecular Formula: C42H85NO8P+ | Mol. Weight: 763.1 | Heavy Atoms: 52 |
Charge: 1 | Is Chiral: True | logP: 12.024 |
HBD: 1 | HBA: 8 | TPSA: 118.17 |
#Bonds: 52 | #Rotatable Bonds: 42 | Shape Complexity: 0.95238096 |
Stereocomplexity: 0.04761905 | Ligand Type: Small Molecule |
Binding Affinity |
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