PDB Entry (3chg) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 3chg | Resolution: 2.8 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 18567662 | DOI: 10.1128/JB.00346-08 | |
Protein |
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Protein Name: Glycine betaine-binding protein OpuAC | |
Protein Class: TRANSPORTER | |
Uniprot ID/ACC: P46922 (OPUAC_BACSU) | Organism: Bacillus subtilis |
Gene Symbol: - | Gene ID: 51993721 |
Pocket Descriptors | |
Volume: 77.44 | Depth: 7.91207 |
Hydrophobicity: 0.774194 | Drug Score: 0.123043 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (dimethyl-lambda~4~-sulfanyl)acetic acid | ||
HET ID: 313 | PubChem: 425293 | |
DrugBank: - | ChEMBL: CHEMBL1230014 | |
Canonical SMILES: C[S](CC(=O)O)C | ||
Standard InChI: InChI=1S/C4H9O2S/c1-7(2)3-4(5)6/h3H2,1-2H3,(H,5,6) | ||
Molecular Formula: C4H9O2S | Mol. Weight: 121.17806 | Heavy Atoms: 7 |
Charge: 0 | Is Chiral: False | logP: 0.5995 |
HBD: 1 | HBA: 2 | TPSA: 62.6 |
#Bonds: 6 | #Rotatable Bonds: 2 | Shape Complexity: 0.75 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | Kd : 102000 nM |