PDB Entry (2wxd) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 2wxd | Resolution: 1.6 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 20124710 | DOI: 10.1107/S1744309109052865 | |
Protein |
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Protein Name: Myrosinase MA1 | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P29736 (MYRA_SINAL) | Organism: Sinapis alba |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 988.608 | Depth: 26.5571 |
Hydrophobicity: 0.710843 | Drug Score: 0.561156 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 2-(DIMETHYLAMINO)ETHYL (1Z)-2-PHENYL-N-(SULFOOXY)ETHANIMIDOTHIOATE | ||
HET ID: E18 | PubChem: 44157894, 72199470 | |
DrugBank: - | ChEMBL: CHEMBL1232437 | |
Canonical SMILES: C[NH+](C)CCSC(=NOS(=O)(=O)[O-])CC1=CC=CC=C1 | ||
Standard InChI: InChI=1S/C12H18N2O4S2/c1-14(2)8-9-19-12(13-18-20(15,16)17)10-11-6-4-3-5-7-11/h3-7H,8-10H2,1-2H3,(H,15,16,17) | ||
Molecular Formula: C12H18N2O4S2 | Mol. Weight: 318.41232 | Heavy Atoms: 20 |
Charge: 0 | Is Chiral: False | logP: 0.9779 |
HBD: 1 | HBA: 6 | TPSA: 116.91 |
#Bonds: 21 | #Rotatable Bonds: 8 | Shape Complexity: 0.41666666 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 3300 nM |
Binding MOAD | IC50 : 3300 nM |