PDB Entry (4nyi)

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Visualizer: MichelaNGLo

PDB ID: 4nyi Resolution: 2.96 Å Exp. Method: X-RAY DIFFRACTION
PMID: 24550516 DOI: 10.1073/pnas.1315798111
Protein
Protein Name: GTPase Hras
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: P01112 (RASH_HUMAN) Organism: Homo sapiens
Gene Symbol: HRAS Gene ID: 3265
Pocket Descriptors
Volume: 109.952 Depth: 11.9049
Hydrophobicity: 0.746835 Drug Score: 0.088168
Pocket Similarity: Calculate
Ligand
Ligand Name:   N-{1-[(5-methyl-1H-indol-3-yl)methyl]piperidin-4-yl}-L-tryptophanamide
HET ID:   2PX PubChem:   73167574
DrugBank:   - ChEMBL:   CHEMBL4166974
Canonical SMILES:   Cc1ccc2c(c1)c(c[nH]2)CN1CCC(CC1)NC(=O)[C@H](Cc1c[nH]c2c1cccc2)N
Standard InChI:   InChI=1S/C26H31N5O/c1-17-6-7-25-22(12-17)19(15-29-25)16-31-10-8-20(9-11-31)30-26(32)23(27)13-18-14-28-24-5-3-2-4-21(18)24/h2-7,12,14-15,20,23,28-29H,8-11,13,16,27H2,1H3,(H,30,32)/t23-/m0/s1
Molecular Formula:   C26H31N5O Mol. Weight:   429.55725 Heavy Atoms:   32
Charge:   0 Is Chiral:   True logP:   4.6373
HBD:   4 HBA:   4 TPSA:   89.94
#Bonds:   39 #Rotatable Bonds:   7 Shape Complexity:   0.34615386
Stereocomplexity:   0.03846154 Ligand Type:   Small Molecule
Binding Affinity
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