PDB Entry (3upe) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 3upe | Resolution: 1.54 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 25003390 | DOI: 10.1515/hsz-2014-0158 | |
Protein |
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Protein Name: Cationic trypsin | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P00760 (TRY1_BOVIN) | Organism: Bos taurus |
Gene Symbol: - | Gene ID: 615026 |
Pocket Descriptors | |
Volume: 291.072 | Depth: 14.0228 |
Hydrophobicity: 0.741935 | Drug Score: 0.406305 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 1-[(7-carbamimidoylnaphthalen-2-yl)methyl]-6-({1-[(1Z)-ethanimidoyl]piperidin-4-yl}oxy)-2-(propan-2-yl)-1H-indole-4-carboxylic acid | ||
HET ID: 0CA | PubChem: 66575067 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CC(=N)N1CCC(CC1)Oc1cc(C(=O)O)c2c(c1)n(Cc1ccc3c(c1)cc(cc3)C(=N)N)c(c2)C(C)C | ||
Standard InChI: InChI=1S/C31H35N5O3/c1-18(2)28-16-26-27(31(37)38)14-25(39-24-8-10-35(11-9-24)19(3)32)15-29(26)36(28)17-20-4-5-21-6-7-22(30(33)34)13-23(21)12-20/h4-7,12-16,18,24,32H,8-11,17H2,1-3H3,(H3,33,34)(H,37,38) | ||
Molecular Formula: C31H35N5O3 | Mol. Weight: 525.6413 | Heavy Atoms: 39 |
Charge: 0 | Is Chiral: False | logP: 6.6265 |
HBD: 4 | HBA: 8 | TPSA: 128.42 |
#Bonds: 43 | #Rotatable Bonds: 8 | Shape Complexity: 0.32258064 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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