PDB Entry (1b5q)

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PDB ID: 1b5q Resolution: 1.9 Å Exp. Method: X-RAY DIFFRACTION
PMID: 10368296 DOI: 10.1016/S0969-2126(99)80037-9
Protein
Protein Name: Polyamine oxidase 1
Protein Class: OXIDOREDUCTASE
Uniprot ID/ACC: O64411 (PAO1_MAIZE) Organism: Zea mays
Gene Symbol: - Gene ID: 541983
Pocket Descriptors
Volume: 495.104 Depth: 42.0625
Hydrophobicity: 0.735113 Drug Score: 0.152087
Pocket Similarity: Calculate
Ligand
Ligand Name:   N,N'-BIS(2,3-BUTADIENYL)-1,4-BUTANE-DIAMINE
HET ID:   MD2 PubChem:   4026
DrugBank:   DB04188 ChEMBL:   CHEMBL417844
Canonical SMILES:   C=C=CCNCCCCNCC=C=C
Standard InChI:   InChI=1S/C12H20N2/c1-3-5-9-13-11-7-8-12-14-10-6-4-2/h5-6,13-14H,1-2,7-12H2
Molecular Formula:   C12H20N2 Mol. Weight:   192.3006 Heavy Atoms:   14
Charge:   0 Is Chiral:   False logP:   2.4098
HBD:   2 HBA:   2 TPSA:   24.06
#Bonds:   13 #Rotatable Bonds:   9 Shape Complexity:   0.6
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
Binding MOAD Ki : 550 nM