PDB Entry (6qpl) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 6qpl | Resolution: 1.6 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31260300 | DOI: 10.1021/acs.jmedchem.9b00522 | |
Protein |
|
Protein Name: Spindlin-1 | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q9Y657 (SPIN1_HUMAN) | Organism: Homo sapiens |
Gene Symbol: SPIN1 | Gene ID: 10927 |
Pocket Descriptors | |
Volume: 246.592 | Depth: 12.2246 |
Hydrophobicity: 0.725806 | Drug Score: 0.0565604 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: [3-(aminomethyl)-5-[3-(1,3-dihydroisoindol-2-yl)propoxy]-4-methoxy-phenyl]methanamine | ||
HET ID: JC5 | PubChem: 138455182 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: NCc1cc(OCCCN2Cc3c(C2)cccc3)c(c(c1)CN)OC | ||
Standard InChI: InChI=1S/C20H27N3O2/c1-24-20-18(12-22)9-15(11-21)10-19(20)25-8-4-7-23-13-16-5-2-3-6-17(16)14-23/h2-3,5-6,9-10H,4,7-8,11-14,21-22H2,1H3 | ||
Molecular Formula: C20H27N3O2 | Mol. Weight: 341.44727 | Heavy Atoms: 25 |
Charge: 0 | Is Chiral: False | logP: 3.7358 |
HBD: 2 | HBA: 5 | TPSA: 73.74 |
#Bonds: 27 | #Rotatable Bonds: 8 | Shape Complexity: 0.4 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
|
Database Name | Value |
Binding MOAD | IC50 : 77 nM |